CDS

Accession Number TCMCG006C89617
gbkey CDS
Protein Id XP_013681684.1
Location join(35138273..35138298,35138379..35138475,35138570..35138691,35138831..35138923,35139011..35139083,35139170..35139260,35139338..35139390,35139685..35139749,35139907..35140012,35140096..35140206,35140325..35140384,35140735..35140767,35140912..35140962,35141034..35141132,35141449..35141508,35141597..35141689,35142023..35142133,35142222..35142332,35142428..35142544,35142710..35142826,35142908..35142988,35143334..35143438,35143530..35143610,35143703..35143840,35143920..35143964,35144196..35144273,35144343..35144482,35144575..35144665,35145041..35145159,35145241..35145376,35145455..35145582,35145812..35145937,35146018..35146073,35146286..35146356,35146449..35146533,35146701..35146804,35146878..35147006,35147275..35147325)
Gene LOC106386379
GeneID 106386379
Organism Brassica napus

Protein

Length 1150aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013826230.2
Definition DNA-directed RNA polymerase III subunit 2-like isoform X2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category K
Description DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KEGG_TC -
KEGG_Module M00181        [VIEW IN KEGG]
KEGG_Reaction R00435        [VIEW IN KEGG]
R00441        [VIEW IN KEGG]
R00442        [VIEW IN KEGG]
R00443        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE br01611        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K03021        [VIEW IN KEGG]
EC 2.7.7.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03020        [VIEW IN KEGG]
ko04623        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03020        [VIEW IN KEGG]
map04623        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0001817        [VIEW IN EMBL-EBI]
GO:0001819        [VIEW IN EMBL-EBI]
GO:0002682        [VIEW IN EMBL-EBI]
GO:0002684        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003899        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005666        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006383        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009553        [VIEW IN EMBL-EBI]
GO:0009561        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031349        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032479        [VIEW IN EMBL-EBI]
GO:0032481        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032648        [VIEW IN EMBL-EBI]
GO:0032728        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034062        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045088        [VIEW IN EMBL-EBI]
GO:0045089        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050776        [VIEW IN EMBL-EBI]
GO:0050778        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0097747        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGACTCGGTCACGAAGATCTAGACTTGACCAACGATGACCATTTCGTTGACAAGCAAAAGCTTTCAGCTCCTATCAAGTCTACAGCTGATAAGTTCCAGCTTGTTCCCGAGTTCTTGAAGGTGAGAGGACTTGTGAAGCAACACCTGGATTCATTCAATTACTTCATCAATGTCGGGATCAGAAAGATTGTTCGTGCTAATTCTCGTATTACATCCACTCTGGACCCATCGATTTATCTAAGGTTTAAGGATGTCAGAGTTGGTGAACCCTGTATTTTAAGCATTAGTATGGCGGAGAAACTCAATCCACACATGTGCCGATTAGCTGATATGACATATGCTGCCCCAATCTTTGTCGACATAGAATATGTTCATGGAAGTCATGGACAGACGACAATAAGTGCAAAGGATAACGTTATTATCGGAAGGATGCCTATTATGTTGCGGAGTTGCCGCTGTGTATTACATGGGAAAGATGAAGAGGAACTTGCAAGATTGGGTGAGTGCCCACTTGATCCTGGAGGATATTTTGTCATCAAAGGAACCGAGAAGGTGTTGTTGATACAAGAACAACTTTCGAAGAACAGAATCATTATTGATTGTGATAAAAAGGGGAACATAAATGCATCTGTCACAAGCAGCACTGAAATGACGAAAAGCAAAACAGTTATTCAGATGGATAAGGAGAAGATATATTTATTTCTACATCAATTTGTAAAAAAGATTCCAATTATAATCGTCCTCAAAGCTATGGGAATGGAGAGTGACCAAGAGATCGTACAAATGGTTGGAAGGGATCCCCGTTTTAGCGCATCACTACTACCCTCGATGGAGGAGTGTATTAGTGAAGGCGTGACTACACGACAAGAAGCACTGGACTATCTTGAGGCAAAGGTGAAGAAATCATCGTATGGACCTCCTGAAAAGGATGGCAAAGCTCTATACATTCTCAGAGCTTTATTCCTTGCACACGTACCTGTGCGTGACAACAATTATCGCCAAAAATGTTTCTATGTTGGGGTGATGTTGAGGAGAATGATTGAAGCAATGTTAAACAAAGATGCCATGGATGACAAGGATTATGTTGGTAACAAGCGGTTGGAGTTATCTGGCCAACTAATATCTCTTCTCTTTGAGGATTTGTTCAAAACAATGACCACTGAGGCCATTAAAAAGGTAGATGGTATCCTTCAAAAACCGACCCGGGCAAGCCGTTTTGATTTTTCACAATGTCTTACTGGAGAGAAGAATCATAATATTTCTTTTGGACTAGAGAGAACCCTTTCAACGGGAAACTTCGATATTAAAAGGTTCAGAATGCATAGGAAAGGCATGACACAGGTTTTGACAAGGTTATCTTTTATCGGGAGCATGGGGTTTATTACGAAAATTTCGCCACAATTCGAGAAGTCTAGAAAAGTTAGTGGGCCTAGATCTTTGCAACCCAGCCAGTGGGGCATGCTATGCCCGTGTGATACCCCAGAAGGCGAAGCTTGTGGTCTTGTCAAGAACTTGGCGTTAATGACTCATGTCACAACGGATATAGAGGAAGGCCCATTGGTTGCTATGTGCTACAAATTGGGTGTCACAGATTTGGAAGTACTATCAGCAGAGGAGCTGCATACTCCAGACTCATTTTTGGTCATATTTAATGGGCTAATAATTGGCAAACATAGAAGGCCACAGTACTTCGCCAATTCTCTTAGAAGGTTGCGTAGAGCTGGGAAAATTGGGGAGTTCGTCAGTGTGTTCATAAACGAAAAGCAGCATTGTGTTTACGTTGCTTCTGATGGTGGGCGGGTGTGTCGTCCACTTGTTATAGCCGATAATGGAGTATCAAGAGTTAAACAATACCACATGAAGGAATTACAGGATGGTGTTCGCACCTTTGATGACTTTATTCGTGAAGGTTTGATCGAGTATCTTGATGTCAATGAGGAAAACAATGCATTGATTGCTTTATACGAAGGTAGCCCCAAGAAAATGAAAGACATAACTCACATTGAGATTGAACCATTCACCATCTTAGGTGTTGTTGCTGGTCTTATCCCCTACCCTCACCATAATCAGTCACCTAGAAATACGTATCAGTGTGCTATGGGAAAACAAGCTATGGGAAATATTGCTTACAACCAGTTAAACCGGATGGACTCATTGCTTTACCTATTGGTGTATCCTCAGCGACCTCTGTTGACAACAAGGACCATTGAATTGGTTGGATACGATAAACTTGGAGCAGGTCAAAATGCAACAGTTGCTGTTATGAGTAATACTGGATACGACATTGAGGATGCGATAGTGATGAACAAAGCTTCCTTGGATCGGGGTTTTGTTCGCTGCATTGTTATGAAAAAATTTGTTGCTATTTGCCAGAAGTATGGTAACGATGCAGTAGACAGAATACTCAGGCCACAAAGAACAGGTCCAGACGCGGAAAAGATGCAGATACTGGATGATGATGGAATAGCATCTCCAGGGGAAATTATTAGACCGAATGATGTCTATATAAATAAGCAAGTCCCTGTGGACACAAGAAATAACATTACATCTCAGCAATCGGATAGTCAATATCGTCCGGCCCGAGAGTATTTTAAAGGTCCTGAAGGGGAAACGCAAGTGGTCGATAGAGTTGCTCTTTGTTCTGACAAGAACGGCAATTTATGCATAAAATGTATCATCCGGCATACTCGTCGGCCAGAGCTTGGCAAGTTCAGCAGTAGGCATGGGCAGAAAGGTGTTTGTGGTACAATCGTTCAGCAGGAAGATTTTCCATTTTCTGAGCGTGGAATTTGCCCTGATTTGATCATGAATCCTCATGGGTTTCCAAGTCGTATGACAGTAGGTAAGATGATAGAGCTCCTTGGGAGTAAGGCTGGGGTGTCTTCAGGTAGATTTCATTATGGTAGTGCTTTTGGAGAAGAAAGTGGTCACGCTGACAAGGTTGAGGAAATAAGTAAGACCCTTGTGAAGCATGGCTTTTCCTACTGTGGGAAGGACTTGTTATACTCAGGTCTCAGTGGTGAGCCATTACAGACATACGTCTTCATGGGGCCAATATATTATCAGAAATTGAAACATATGGTCCTGGACAAAATGCATGCACGAGGGAGTGGACCCCGTGTGATGATGACAAGACAGCCAACTGAAGGGAAATCTAAAAATGGAGGTTTACGAGTGGGAGAGATGGAACGAGATTGCCTTATTGCTTATGGAGCGAGCATGTTGATCTATGAGCGGCTCATGCTTTCTAGTGATCCTTTTGAAGTTCAGGTTTGTAGAGCTTGCGGTTTATTGGGATATTACGATTACAAGCTGAAGAAAGCAGTTTGTTCAACATGTAAGAATGGTGATAGCATTGCTACTATGAAACTCCCTTACGCATGCAAGCTCCTCTTCCAGGAACTCCAGTCGATGAATGTTGTTCCCCGTCTGAAACTCGTGGAGTCTTGA
Protein:  
MGLGHEDLDLTNDDHFVDKQKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVGIRKIVRANSRITSTLDPSIYLRFKDVRVGEPCILSISMAEKLNPHMCRLADMTYAAPIFVDIEYVHGSHGQTTISAKDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFVIKGTEKVLLIQEQLSKNRIIIDCDKKGNINASVTSSTEMTKSKTVIQMDKEKIYLFLHQFVKKIPIIIVLKAMGMESDQEIVQMVGRDPRFSASLLPSMEECISEGVTTRQEALDYLEAKVKKSSYGPPEKDGKALYILRALFLAHVPVRDNNYRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMTTEAIKKVDGILQKPTRASRFDFSQCLTGEKNHNISFGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITKISPQFEKSRKVSGPRSLQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDIEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFLVIFNGLIIGKHRRPQYFANSLRRLRRAGKIGEFVSVFINEKQHCVYVASDGGRVCRPLVIADNGVSRVKQYHMKELQDGVRTFDDFIREGLIEYLDVNEENNALIALYEGSPKKMKDITHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSNTGYDIEDAIVMNKASLDRGFVRCIVMKKFVAICQKYGNDAVDRILRPQRTGPDAEKMQILDDDGIASPGEIIRPNDVYINKQVPVDTRNNITSQQSDSQYRPAREYFKGPEGETQVVDRVALCSDKNGNLCIKCIIRHTRRPELGKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHYGSAFGEESGHADKVEEISKTLVKHGFSYCGKDLLYSGLSGEPLQTYVFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFEVQVCRACGLLGYYDYKLKKAVCSTCKNGDSIATMKLPYACKLLFQELQSMNVVPRLKLVES